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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17146834_17148069_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17146834 - 17148069

Intron Length:

1236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTTGG

5'SS Class:

major

3'SS Sequence:

TCTTATCCTGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

GTGCTCTTATCC

Flanking Amino Acid:

KSLSLESSDHPAVTGCAVTV

Intron Amino Acid Position:

1701

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

67.8

39.9

Major BPS

84.4

0.85

1.1

34.5

Major PPT

71.9

0.49

72.2

32.5

Minor 5ss

36.6

-1.5

2.9

44.8

43.4

Minor BPS

56.5

0.18

1.6

64.19

41.3

Associated Gene:

Gene:

CDC42BPA

Ensembl Gene ID:

ENSAPLG00000012422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013024

17044224 - 17148188

103965