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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17207243_17209055_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17207243 - 17209055

Intron Length:

1813

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTAAG

5'SS Class:

major

3'SS Sequence:

CTCTTTCTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

TGTGTCTGATTT

Flanking Amino Acid:

EPIFPALIYSSAMIWTVGMA

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

67.3

39.4

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

83.6

0.76

0.7

76.9

31.9

Minor 5ss

32.5

-2

2.8

43.3

43.8

Minor BPS

1.8

68.88

42.5

Associated Gene:

Gene:

PSEN2

Ensembl Gene ID:

ENSAPLG00000014082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042818

17202898 - 17219662

16765

ENSAPLT00000041399

17201332 - 17214610

13279

ENSAPLT00000014712

17193960 - 17214610

20651