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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17211001_17211611_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17211001 - 17211611

Intron Length:

611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCAT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTCTTAATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTCAC

U12 Branch Point Sequence:

TTGCTCTTAATA

Flanking Amino Acid:

VVLYKYRCYKFIHGWLILSS

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

39.3

Major BPS

54.8

0.12

1.2

58.7

38.1

Major PPT

73.2

0.52

0.9

35.2

Minor 5ss

31.8

-2.1

3.5

46.7

48.6

Minor BPS

73.2

0.72

1.2

76.21

35.2

Associated Gene:

Gene:

PSEN2

Ensembl Gene ID:

ENSAPLG00000014082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014712

17193960 - 17214610

20651

ENSAPLT00000042818

17202898 - 17219662

16765

ENSAPLT00000041399

17201332 - 17214610

13279