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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17304402_17305250_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17304402 - 17305250

Intron Length:

849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTTAC

U12 Branch Point Sequence:

AATGTCTTACCA

Flanking Amino Acid:

FWGMDMVILARSSRSHLC*

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

83.5

27.8

Major BPS

63.8

0.34

1.2

57.4

41.4

Major PPT

74.7

0.55

1.1

75.2

38.8

Minor 5ss

37.7

-1.4

2.7

44.2

Minor BPS

56.7

0.21

1.7

66.22

40.3

Associated Gene:

Gene:

STUM

Ensembl Gene ID:

ENSAPLG00000017920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035825

17303540 - 17331984

28445