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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17305431_17331266_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17305431 - 17331266

Intron Length:

25836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGAGC

5'SS Class:

major

3'SS Sequence:

GCTCTCTCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTACAC

U12 Branch Point Sequence:

GTGGCTTACACT

Flanking Amino Acid:

LFLNTFVPGLGTLVSAFTVL

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

67.8

43.5

Major BPS

60.5

0.26

1.1

70.3

34.5

Major PPT

70.6

0.46

0.8

64.9

30.8

Minor 5ss

32.2

-2

3.1

34.8

41.4

Minor BPS

45.6

-0.2

2.1

63.58

Associated Gene:

Gene:

STUM

Ensembl Gene ID:

ENSAPLG00000017920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042422

17300080 - 17331453

31374

ENSAPLT00000035862

17298257 - 17331984

33728

ENSAPLT00000035825

17303540 - 17331984

28445