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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17392047_17402856_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17392047 - 17402856

Intron Length:

10810

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

TGTTCTATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

ATTTTCTGATGT

Flanking Amino Acid:

MAELDQLPDESSSAKALVSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.47

1.1

59.5

39.8

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

83.5

0.75

0.8

77.9

35.1

Minor 5ss

31.3

-2.1

2.8

33.6

34.8

Minor BPS

50.2

0.09

74.74

42.1

Associated Gene:

Gene:

LIN9

Ensembl Gene ID:

ENSAPLG00000013627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014263

17391968 - 17430163

38196

ENSAPLT00000024400

17391968 - 17430163

38196