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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17409909_17412411_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17409909 - 17412411

Intron Length:

2503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

GATGTTTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTCTTTTGATG

Flanking Amino Acid:

IYEWFYSNIDKPLFEGDNDF

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

86.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

68.4

0.41

62.6

42.9

Minor 5ss

49.5

-0

2.5

68.8

35.6

Minor BPS

62.4

0.24

1.3

66.85

35.2

Associated Gene:

Gene:

LIN9

Ensembl Gene ID:

ENSAPLG00000013627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024400

17391968 - 17430163

38196

ENSAPLT00000014263

17391968 - 17430163

38196