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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17418209_17419202_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17418209 - 17419202

Intron Length:

994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTCATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

AGCACCTGAAGT

Flanking Amino Acid:

TQTVPDYEVLSNEPHETMPI

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

85.6

30.4

Major BPS

72.5

0.56

1.2

39.9

Major PPT

74.7

0.56

0.9

68.6

36.5

Minor 5ss

44.2

-0.6

2.9

66.4

38.5

Minor BPS

49.5

0.04

1.8

65.05

44.8

Associated Gene:

Gene:

LIN9

Ensembl Gene ID:

ENSAPLG00000013627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024400

17391968 - 17430163

38196

ENSAPLT00000014263

17391968 - 17430163

38196