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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17419323_17419492_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17419323 - 17419492

Intron Length:

170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGCTAC

5'SS Class:

major

3'SS Sequence:

TCTTTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

ATTTACTGAAAT

Flanking Amino Acid:

YTPALQSPITDSDPLLGQSS

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

63.4

38.1

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

90.9

0.92

0.6

87.5

22.9

Minor 5ss

46.3

-0.4

2.8

64.5

41.1

Minor BPS

62.4

0.47

1.7

82.41

37.8

Associated Gene:

Gene:

LIN9

Ensembl Gene ID:

ENSAPLG00000013627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024400

17391968 - 17430163

38196

ENSAPLT00000014263

17391968 - 17430163

38196