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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17428444_17428540_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17428444 - 17428540

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAA

U12 Branch Point Sequence:

ACTGTTTGAACT

Flanking Amino Acid:

RLTAILLQIKCLAEGGDLNS

Intron Amino Acid Position:

493

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

74.9

36.1

Major BPS

69.4

0.48

1.2

63.4

44.3

Major PPT

86.3

0.82

0.7

81.2

23.9

Minor 5ss

-1.2

3.2

56.6

47.5

Minor BPS

55.8

0.26

1.5

70.14

41.3

Associated Gene:

Gene:

LIN9

Ensembl Gene ID:

ENSAPLG00000013627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024400

17391968 - 17430163

38196

ENSAPLT00000014263

17391968 - 17430163

38196