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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17428639_17429774_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17428639 - 17429774

Intron Length:

1136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTACTT

5'SS Class:

major

3'SS Sequence:

TTTTCCTCTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TGAGGTTTAATC

Flanking Amino Acid:

IKNSIDSSNISCFQNNVEIH

Intron Amino Acid Position:

525

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

40.1

Major BPS

81.8

0.79

1.1

34.5

Major PPT

85.9

0.81

0.6

81.9

22.8

Minor 5ss

44.1

-0.6

3.1

65.7

45.3

Minor BPS

49.7

-0

1.8

59.25

40.5

Associated Gene:

Gene:

LIN9

Ensembl Gene ID:

ENSAPLG00000013627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024400

17391968 - 17430163

38196

ENSAPLT00000014263

17391968 - 17430163

38196