Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_17460930_17461649_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17460930 - 17461649

Intron Length:

720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGACTA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCTGTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

AAAAACTTAACT

Flanking Amino Acid:

LEEALENGPKDSVPVIAAPS

Intron Amino Acid Position:

407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.7

40.1

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

72.3

0.5

0.9

65.4

36.1

Minor 5ss

34.1

-1.8

3.5

47.2

48.2

Minor BPS

0.52

1.5

75.2

40.3

Associated Gene:

Gene:

ACBD3

Ensembl Gene ID:

ENSAPLG00000013267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013825

17449138 - 17464192

15055