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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17484211_17486925_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17484211 - 17486925

Intron Length:

2715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTATACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

GTGTTCTTAACT

Flanking Amino Acid:

FQSAAIGALQEASEAYLVGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

82.2

0.8

71.9

35.8

Major PPT

70.4

0.46

64.3

41.4

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

81.5

1.07

1.1

88.34

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020792

17483778 - 17490147

6370