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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17513488_17514108_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17513488 - 17514108

Intron Length:

621

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

CTGGTTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

AAATATTTAAGT

Flanking Amino Acid:

GTKYGKKKCFLLGLEGLDDT

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

79.2

33.9

Major BPS

79.5

0.73

0.9

36.9

Major PPT

74.9

0.56

68.6

Minor 5ss

40.9

-1

2.8

58.9

39.3

Minor BPS

54.1

0.21

1.8

69.54

Associated Gene:

Gene:

SDE2

Ensembl Gene ID:

ENSAPLG00000013231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013778

17509316 - 17518188

8873