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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17544308_17545249_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

17544308 - 17545249

Intron Length:

942

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTATGCTTT

5'SS Class:

weak_major

3'SS Sequence:

TCTTTTTATTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTCTTTTTATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

71.4

41.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.4

0.62

83.4

Minor 5ss

0.64

2.2

73.3

43.5

Minor BPS

61.5

0.44

1.6

80.48

35.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012891

17544186 - 17570957

26772