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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17549225_17550363_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17549225 - 17550363

Intron Length:

1139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TCTTTCTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TCTTTCTTTATA

Flanking Amino Acid:

LVPEALEYDSGFCSWMTAAF

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

83.8

34.5

Major BPS

73.8

0.59

1.3

72.8

Major PPT

88.1

0.86

0.6

24.2

Minor 5ss

43.7

-0.7

2.9

61.3

Minor BPS

66.2

0.5

1.6

74.21

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012891

17544186 - 17570957

26772