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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17554569_17555102_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17554569 - 17555102

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTCTTT

5'SS Class:

major

3'SS Sequence:

TTTTTCTATCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

ATTTTTCTATCT

Flanking Amino Acid:

VARLIYLFKKRKQAEKSLTY

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

71.8

40.6

Major BPS

73.8

0.59

1.3

72.8

Major PPT

84.1

0.77

0.8

78.4

35.1

Minor 5ss

48.8

-0.1

3.1

73.8

42.7

Minor BPS

54.4

0.22

1.9

78.41

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012891

17544186 - 17570957

26772