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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17555728_17558449_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17555728 - 17558449

Intron Length:

2722

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAA

U12 Branch Point Sequence:

CCCTCCTTACAG

Flanking Amino Acid:

VTFQEKSMATYVLKDFNACK

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

83.4

Major BPS

53.6

0.09

59.9

32.5

Major PPT

81.9

0.72

0.7

75.6

26.6

Minor 5ss

-0.2

2.8

68.9

36.6

Minor BPS

49.5

-0.1

1.9

51.73

48.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012891

17544186 - 17570957

26772