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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17569648_17570033_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17569648 - 17570033

Intron Length:

386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCGAT

5'SS Class:

strong_major

3'SS Sequence:

TTACTGGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATTAC

U12 Branch Point Sequence:

CCCCCCATTACT

Flanking Amino Acid:

FKHLSPLNYKVEGMQCESGS

Intron Amino Acid Position:

729

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

81.4

32.7

Major BPS

49.9

-0

1.2

43.3

37.4

Major PPT

75.2

0.57

68.3

42.1

Minor 5ss

-1.4

3.4

49.2

Minor BPS

47.4

-0.1

62.49

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012891

17544186 - 17570957

26772