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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17575321_17580660_R

Intron Information:

Intron Rank:

147643

Intron Class:

major

Intron Phase:

Intron Coordinates:

17575321 - 17580660

Intron Length:

5340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

ACTAATCCAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

34.9

Major BPS

77.9

0.69

0.8

75.9

Major PPT

83.1

0.74

0.7

76.4

32.2

Minor 5ss

42.1

-0.9

2.9

55.5

43.9

Minor BPS

43.5

-0.4

1.9

61.33

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047058

17574889 - 17581430

6542