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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17674966_17676855_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17674966 - 17676855

Intron Length:

1890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCCCGGG

5'SS Class:

weak_major

3'SS Sequence:

TTCCTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTGACTATGAGT

Flanking Amino Acid:

QTQKADKLHEEYESLEQENT

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.9

0.21

1.2

45.2

44.9

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

85.1

0.79

0.7

76.9

31.8

Minor 5ss

34.8

-1.7

3.5

46.9

48.5

Minor BPS

47.4

-0.1

1.9

68.43

42.8

Associated Gene:

Gene:

BATF3

Ensembl Gene ID:

ENSAPLG00000025402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027268

17674303 - 17677590

3288