Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_17692816_17693077_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17692816 - 17693077

Intron Length:

262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGGGGT

5'SS Class:

major

3'SS Sequence:

GTTCTGTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAC

U12 Branch Point Sequence:

TGCTCCTTCACG

Flanking Amino Acid:

EFCRVMELSERFPGFVLPCL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

64.1

42.1

Major BPS

65.1

0.38

1.1

68.9

36.5

Major PPT

69.2

0.43

44.6

Minor 5ss

24.4

-2.9

3.6

37.8

Minor BPS

64.6

0.31

1.9

67.9

45.5

Associated Gene:

Gene:

TATDN3

Ensembl Gene ID:

ENSAPLG00000011801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041240

17692468 - 17696663

4196

ENSAPLT00000012302

17692468 - 17696663

4196