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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17694090_17694487_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17694090 - 17694487

Intron Length:

398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

CCTTGGTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

AATTTCCTAATG

Flanking Amino Acid:

VELARRLDLPLNVHSRSAGR

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

32.8

Major BPS

81.9

0.79

0.9

80.1

Major PPT

70.6

0.46

64.3

41.5

Minor 5ss

41.2

-1

3.4

64.1

41.5

Minor BPS

58.1

0.12

1.7

63.46

38.4

Associated Gene:

Gene:

TATDN3

Ensembl Gene ID:

ENSAPLG00000011801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042325

17691791 - 17696663

4873

ENSAPLT00000041240

17692468 - 17696663

4196

ENSAPLT00000012302

17692468 - 17696663

4196