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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17730347_17732855_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17730347 - 17732855

Intron Length:

2509

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGGCA

5'SS Class:

major

3'SS Sequence:

TTCGTTTGTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTATTT

Flanking Amino Acid:

AIRSAARLARPSVPPVPNYK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

66.7

39.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.4

0.66

0.9

72.5

42.4

Minor 5ss

29.1

-2.4

3.4

30.5

42.8

Minor BPS

64.4

0.53

1.7

84.57

36.4

Associated Gene:

Gene:

VASH2

Ensembl Gene ID:

ENSAPLG00000011439

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011910

17730164 - 17752121

21958