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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17787626_17788501_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

17787626 - 17788501

Intron Length:

876

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACAGTT

5'SS Class:

major

3'SS Sequence:

ATTTCTGGTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGCAT

U12 Branch Point Sequence:

ATATGTTGAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

1.1

78.9

35.3

Major BPS

67.2

0.43

1.4

77.7

37.1

Major PPT

74.8

0.56

69.6

Minor 5ss

41.9

-0.9

3.5

64.8

46.5

Minor BPS

52.7

0.16

1.8

71.91

39.4

Associated Gene:

Gene:

RPS6KC1

Ensembl Gene ID:

ENSAPLG00000011098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020984

17787590 - 17867791

80202