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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17798852_17801033_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17798852 - 17801033

Intron Length:

2182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTAG

5'SS Class:

major

3'SS Sequence:

TCTTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

AGCTCAGTAATT

Flanking Amino Acid:

NSKQLEEFFKGGEVHDGSEL

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.2

68.7

38.4

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

93.4

0.98

0.6

92.1

18.5

Minor 5ss

-0.9

2.5

49.5

46.8

Minor BPS

48.2

-0

2.2

68.15

42.8

Associated Gene:

Gene:

RPS6KC1

Ensembl Gene ID:

ENSAPLG00000011098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020984

17787590 - 17867791

80202

ENSAPLT00000011587

17782127 - 17867791

85665

ENSAPLT00000038908

17782127 - 17867791

85665

ENSAPLT00000035251

17782127 - 17867791

85665