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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17821556_17829383_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17821556 - 17829383

Intron Length:

7828

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGCTTT

5'SS Class:

major

3'SS Sequence:

TATCTTCCATTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TAATCTTTGATA

Flanking Amino Acid:

KPSEDTSVSMPPGSLSSRPS

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

71.5

41.1

Major BPS

0.85

0.9

39.9

Major PPT

72.1

0.5

0.9

71.9

33.7

Minor 5ss

48.5

-0.1

3.2

69.4

43.7

Minor BPS

69.5

0.61

1.1

71.51

34.3

Associated Gene:

Gene:

RPS6KC1

Ensembl Gene ID:

ENSAPLG00000011098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020984

17787590 - 17867791

80202

ENSAPLT00000011587

17782127 - 17867791

85665

ENSAPLT00000038908

17782127 - 17867791

85665