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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17821556_17840587_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17821556 - 17840587

Intron Length:

19032

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGCTTT

5'SS Class:

major

3'SS Sequence:

GCTTTTTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTCTCTGAATG

Flanking Amino Acid:

KPSEDTSVSMVLLVMDTRTQ

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

71.5

41.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

78.1

0.63

0.8

77.2

31.6

Minor 5ss

48.5

-0.1

3.2

69.4

43.7

Minor BPS

63.9

0.3

1.5

69.48

37.9

Associated Gene:

Gene:

RPS6KC1

Ensembl Gene ID:

ENSAPLG00000011098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035251

17782127 - 17867791

85665