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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17829477_17840587_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17829477 - 17840587

Intron Length:

11111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTCTT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTCTCTGAATG

Flanking Amino Acid:

AFRVLGVIDKVLLVMDTRTQ

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

83.7

34.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

78.1

0.63

0.8

77.2

31.6

Minor 5ss

40.2

-1.1

3.1

59.2

45.2

Minor BPS

63.9

0.3

1.5

69.48

37.9

Associated Gene:

Gene:

RPS6KC1

Ensembl Gene ID:

ENSAPLG00000011098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038908

17782127 - 17867791

85665

ENSAPLT00000020984

17787590 - 17867791

80202

ENSAPLT00000011587

17782127 - 17867791

85665