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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17840636_17842220_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17840636 - 17842220

Intron Length:

1585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTCTGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAC

U12 Branch Point Sequence:

TACAACTGACCT

Flanking Amino Acid:

TRTQQTFILKGLRKSSEYSR

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

88.4

18.8

Major BPS

64.8

0.37

0.9

55.1

32.8

Major PPT

77.7

0.62

77.4

36.9

Minor 5ss

29.6

-2.3

2.6

32.7

42.2

Minor BPS

46.2

-0.2

1.9

64.1

45.3

Associated Gene:

Gene:

RPS6KC1

Ensembl Gene ID:

ENSAPLG00000011098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020984

17787590 - 17867791

80202

ENSAPLT00000011587

17782127 - 17867791

85665

ENSAPLT00000038908

17782127 - 17867791

85665

ENSAPLT00000035251

17782127 - 17867791

85665