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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17851484_17851754_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17851484 - 17851754

Intron Length:

271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGGAAC

5'SS Class:

major

3'SS Sequence:

GTTTTGTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

AATGTTTTGATT

Flanking Amino Acid:

NPNNILLNDRGHIQLTYFSR

Intron Amino Acid Position:

957

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.3

38.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

0.74

0.8

81.2

36.5

Minor 5ss

-2.5

2.9

33.9

41.8

Minor BPS

56.4

0.28

1.3

68.66

36.8

Associated Gene:

Gene:

RPS6KC1

Ensembl Gene ID:

ENSAPLG00000011098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035251

17782127 - 17867791

85665

ENSAPLT00000020984

17787590 - 17867791

80202

ENSAPLT00000011587

17782127 - 17867791

85665