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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17851845_17863571_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17851845 - 17863571

Intron Length:

11727

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGAGCA

5'SS Class:

major

3'SS Sequence:

GTCTCGTGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTAATATTAATT

Flanking Amino Acid:

DAIERMYCAPEVGAILEETE

Intron Amino Acid Position:

987

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

69.9

34.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

67.6

0.4

65.3

41.1

Minor 5ss

27.1

-2.6

31.6

42.2

Minor BPS

62.3

0.47

1.6

78.63

37.3

Associated Gene:

Gene:

RPS6KC1

Ensembl Gene ID:

ENSAPLG00000011098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020984

17787590 - 17867791

80202

ENSAPLT00000011587

17782127 - 17867791

85665

ENSAPLT00000035251

17782127 - 17867791

85665