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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17864566_17867680_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17864566 - 17867680

Intron Length:

3115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATATCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTTTTTATAT

Flanking Amino Acid:

SKEARSLIQQLLQFNPAERL

Intron Amino Acid Position:

1047

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

74.2

36.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

73.8

0.54

1.1

73.2

40.6

Minor 5ss

32.1

-2

3.1

40.2

45.9

Minor BPS

58.3

0.34

1.7

76.11

Associated Gene:

Gene:

RPS6KC1

Ensembl Gene ID:

ENSAPLG00000011098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020984

17787590 - 17867791

80202

ENSAPLT00000011587

17782127 - 17867791

85665

ENSAPLT00000038908

17782127 - 17867791

85665

ENSAPLT00000035251

17782127 - 17867791

85665