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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17976396_17982021_F

Intron Information:

Intron Rank:

142055

Intron Class:

major

Intron Phase:

Intron Coordinates:

17976396 - 17982021

Intron Length:

5626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

ATATTCCTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CTTTTTGTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

73.2

37.5

Major BPS

84.4

0.85

1.1

34.5

Major PPT

77.5

0.62

0.8

35.1

Minor 5ss

31.6

-2.1

3.4

43.4

44.3

Minor BPS

55.5

0.17

69.67

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026461

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036230

17975800 - 17982714

6915