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Intron Name: Anas_platyrhynchos_platyrhynchos_3_18331350_18334213_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18331350 - 18334213

Intron Length:

2864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCGG

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

GCTTTATTAAAT

Flanking Amino Acid:

RGSHCDGCFARKEGLSKCGR

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

55.2

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

85.2

0.79

0.9

90.8

21.8

Minor 5ss

28.8

-2.4

3.4

38.1

46.9

Minor BPS

59.4

0.37

1.7

74.95

41.3

Associated Gene:

Gene:

SMYD2

Ensembl Gene ID:

ENSAPLG00000010622

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024284

18330835 - 18356366

25532

ENSAPLT00000011094

18330835 - 18358558

27724