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Intron Name: Anas_platyrhynchos_platyrhynchos_3_18334278_18340470_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18334278 - 18340470

Intron Length:

6193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCAA

5'SS Class:

strong_major

3'SS Sequence:

TCTACCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TATTTTTTGACA

Flanking Amino Acid:

QAFYCDVECQKEDWPMHKLE

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

67.5

39.2

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

82.7

0.74

0.8

76.7

31.7

Minor 5ss

36.2

-1.6

3.2

46.5

48.8

Minor BPS

0.75

1.1

78.4

31.4

Associated Gene:

Gene:

SMYD2

Ensembl Gene ID:

ENSAPLG00000010622

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024284

18330835 - 18356366

25532

ENSAPLT00000011094

18330835 - 18358558

27724