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Intron Name: Anas_platyrhynchos_platyrhynchos_3_18342294_18344235_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18342294 - 18344235

Intron Length:

1942

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TGTTACTGAACT

Flanking Amino Acid:

ELLAVKEFESHLDKLDNEKR

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

1.2

83.2

30.8

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

81.2

0.7

0.8

75.9

32.8

Minor 5ss

36.4

-1.5

2.7

41.6

38.3

Minor BPS

70.4

0.72

1.6

87.42

37.1

Associated Gene:

Gene:

SMYD2

Ensembl Gene ID:

ENSAPLG00000010622

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024284

18330835 - 18356366

25532

ENSAPLT00000011094

18330835 - 18358558

27724