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Intron Name: Anas_platyrhynchos_platyrhynchos_3_18347751_18349515_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18347751 - 18349515

Intron Length:

1765

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAGGTTGA

5'SS Class:

major

3'SS Sequence:

TCTGCTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAAAAAA

U12 Branch Point Sequence:

TCTGCTTTTACA

Flanking Amino Acid:

LSHLGSAIFPDVALMNHSCC

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.8

0.37

1.1

59.6

42.3

Major BPS

44.4

-0.3

1.1

45.6

33.7

Major PPT

85.3

0.79

0.8

79.4

32.6

Minor 5ss

39.4

-1.2

3.1

44.6

44.5

Minor BPS

60.6

0.33

1.8

70.62

41.9

Associated Gene:

Gene:

SMYD2

Ensembl Gene ID:

ENSAPLG00000010622

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024284

18330835 - 18356366

25532

ENSAPLT00000011094

18330835 - 18358558

27724