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Intron Name: Anas_platyrhynchos_platyrhynchos_3_18352034_18353713_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18352034 - 18353713

Intron Length:

1680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

CATTTATGACAT

Flanking Amino Acid:

DCRECTTKEKDGEKLKIRKL

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

76.3

0.65

67.3

39.3

Major PPT

83.6

0.76

0.8

81.3

30.7

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

42.9

-0.4

60.16

42.8

Associated Gene:

Gene:

SMYD2

Ensembl Gene ID:

ENSAPLG00000010622

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024284

18330835 - 18356366

25532

ENSAPLT00000011094

18330835 - 18358558

27724