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Intron Name: Anas_platyrhynchos_platyrhynchos_3_18354610_18355939_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18354610 - 18355939

Intron Length:

1330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGCG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

GTTTGATGAAGT

Flanking Amino Acid:

RYGQKIIRPYSQHYPAYSLN

Intron Amino Acid Position:

485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

72.1

37.7

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

89.1

0.88

0.6

84.4

23.4

Minor 5ss

32.4

-2

3.2

41.3

45.2

Minor BPS

45.8

-0.2

2.3

70.98

45.3

Associated Gene:

Gene:

SMYD2

Ensembl Gene ID:

ENSAPLG00000010622

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011094

18330835 - 18358558

27724

ENSAPLT00000024284

18330835 - 18356366

25532