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Intron Name: Anas_platyrhynchos_platyrhynchos_3_18356049_18356164_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18356049 - 18356164

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATCTCCT

5'SS Class:

weak_major

3'SS Sequence:

TATTTGCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

ATTTGCTTACAG

Flanking Amino Acid:

RPAGVKALKREFWLSFDFSK

Intron Amino Acid Position:

522

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.33

1.2

58.9

45.7

Major BPS

84.4

0.85

34.5

Major PPT

83.5

0.75

0.9

76.8

37.1

Minor 5ss

48.1

-0.2

2.5

44.4

Minor BPS

49.4

-0.1

2.2

62.9

44.8

Associated Gene:

Gene:

SMYD2

Ensembl Gene ID:

ENSAPLG00000010622

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024284

18330835 - 18356366

25532