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Intron Name: Anas_platyrhynchos_platyrhynchos_3_18398535_18401062_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18398535 - 18401062

Intron Length:

2528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

AAGTGCTAAAAT

Flanking Amino Acid:

GIRLAGLAVQADFGDYNQFE

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

33.3

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

91.2

0.93

0.7

84.6

Minor 5ss

37.3

-1.4

47.8

47.6

Minor BPS

47.1

-0.1

2.1

64.71

45.3

Associated Gene:

Gene:

PTPN14

Ensembl Gene ID:

ENSAPLG00000010016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010475

18365982 - 18433365

67384