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Intron Name: Anas_platyrhynchos_platyrhynchos_3_18452585_18472895_R

Intron Information:

Intron Rank:

133947

Intron Class:

major

Intron Phase:

Intron Coordinates:

18452585 - 18472895

Intron Length:

20311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TATTCCATTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TATTGTTTATTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

68.6

0.42

1.1

65.6

39.7

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

52.2

0.05

66.86

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025794

18450847 - 18473624

22778