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Intron Name: Anas_platyrhynchos_platyrhynchos_3_18489355_18492073_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18489355 - 18492073

Intron Length:

2719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGGTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAGGAT

U12 Branch Point Sequence:

TTTTTGGTCACA

Flanking Amino Acid:

ELELRTIQVNKINQPYPQQS

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

1.2

85.3

32.2

Major BPS

51.9

0.05

1.4

51.7

43.9

Major PPT

81.2

0.7

0.9

75.8

38.1

Minor 5ss

41.7

-0.9

2.8

54.1

36.1

Minor BPS

44.1

-0.4

2.8

70.02

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038477

18483859 - 18522420

38562

ENSAPLT00000017423

18483859 - 18522420

38562

ENSAPLT00000010344

18484125 - 18521210

37086