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Intron Name: Anas_platyrhynchos_platyrhynchos_3_18495561_18495989_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

18495561 - 18495989

Intron Length:

429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTCAT

5'SS Class:

major

3'SS Sequence:

CTAATTATTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

GCATTTTTAACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

39.5

Major BPS

87.3

0.93

0.8

36.5

Major PPT

72.1

0.5

0.9

66.7

Minor 5ss

38.1

-1.3

3.1

55.9

42.3

Minor BPS

64.1

0.3

1.4

60.13

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046668

18494996 - 18522420

27425