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Intron Name: Anas_platyrhynchos_platyrhynchos_3_18507455_18508996_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18507455 - 18508996

Intron Length:

1542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTAAACTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATCTTTTTAATT

Flanking Amino Acid:

HSLLCTDTENNAQQENDSLY

Intron Amino Acid Position:

1385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

1.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.8

0.6

69.9

40.8

Minor 5ss

38.8

-1.3

2.8

50.6

39.2

Minor BPS

73.5

0.82

1.1

81.14

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025653

18490082 - 18522420

32339

ENSAPLT00000017423

18483859 - 18522420

38562

ENSAPLT00000046668

18494996 - 18522420

27425

ENSAPLT00000010344

18484125 - 18521210

37086

ENSAPLT00000038477

18483859 - 18522420

38562

ENSAPLT00000025972

18499996 - 18521210

21215