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Intron Name: Anas_platyrhynchos_platyrhynchos_3_18512018_18513148_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18512018 - 18513148

Intron Length:

1131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTTAGTTAC

5'SS Class:

major

3'SS Sequence:

TTACTGTTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TGTTCTATTACT

Flanking Amino Acid:

LLQELSEKNKTQLHITMSEK

Intron Amino Acid Position:

2204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.2

73.3

31.9

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

0.65

0.9

77.3

36.7

Minor 5ss

38.6

-1.3

2.7

45.8

36.2

Minor BPS

59.5

0.38

1.9

82.04

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038477

18483859 - 18522420

38562

ENSAPLT00000025653

18490082 - 18522420

32339

ENSAPLT00000017423

18483859 - 18522420

38562

ENSAPLT00000010344

18484125 - 18521210

37086

ENSAPLT00000046668

18494996 - 18522420

27425