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Intron Name: Anas_platyrhynchos_platyrhynchos_3_18516039_18518302_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18516039 - 18518302

Intron Length:

2264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGAA

5'SS Class:

strong_major

3'SS Sequence:

GTTCATTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

CTGTGTTTAATA

Flanking Amino Acid:

KKDLNVSEKEGFADIPTGKV

Intron Amino Acid Position:

2323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

77.6

32.8

Major BPS

81.8

0.79

1.1

34.5

Major PPT

0.72

0.9

73.1

41.8

Minor 5ss

37.5

-1.4

3.2

47.2

Minor BPS

58.5

0.26

1.8

66.12

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010344

18484125 - 18521210

37086