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Intron Name: Anas_platyrhynchos_platyrhynchos_3_18536813_18537454_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18536813 - 18537454

Intron Length:

642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TGTATTTGTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

GCTTATGTATTT

Flanking Amino Acid:

SLFPGLQLKEKGEEYLRFLQ

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

23.8

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

73.7

0.53

69.6

41.4

Minor 5ss

41.2

-1

2.8

49.4

41.3

Minor BPS

42.7

-0.4

2.2

60.8

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026344

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019019

18524308 - 18574924

50617