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Intron Name: Anas_platyrhynchos_platyrhynchos_3_18554302_18557239_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18554302 - 18557239

Intron Length:

2938

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTAATACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTTTTGTTAATA

Flanking Amino Acid:

AHYKKLMSAKAAVDSSAPKS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.9

Major BPS

84.4

0.85

34.5

Major PPT

79.4

0.66

74.1

39.5

Minor 5ss

42.4

-0.8

3.1

57.3

47.4

Minor BPS

68.4

0.57

82.43

32.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026344

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019019

18524308 - 18574924

50617